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Staff Profile

Dr Simon Cockell

Senior Lecturer in Bioinformatics and Research Theme Lead in Precision Medicine, Genomics and Informatics

  • Email: simon.cockell@ncl.ac.uk
  • Telephone: +44 (0) 191 208 0567
  • Personal Website:
  • Address: Faculty of Medical Sciences
    University of 缅北禁地 upon Tyne
    Framlington Place
    缅北禁地 upon Tyne
    NE2 4HH
Background

Background

My background is in experimental molecular biology, particularly the scaffolding of signal transduction processes. Since leaving the lab to pursue a Bioinformatics career, I have gained an MRes degree in the subject, and spent 15 years in the providing practical support to a wide array of researchers. I led the BSU for 9 years (2011-2020), before being appointed as Senior Lecturer in Bioinformatics in the School of Biomedical, Nutritional and Sports Sciences.

Roles and Responsibilities

Senior Lecturer in Bioinformatics in the School of Biomedical, Nutritional and Sport Sciences.

Director of Research, School of Biomedical, Nutritional and Sport Sciences.

Qualifications

B.Sc. (Hons) - Biochemistry and Genetics - University of Nottingham, 1999
Ph.D. - Genetics - University of Leicester, 2004
M.Res. - Bioinformatics and Computational Biology - University of Leeds, 2005

Research

Research Interests

I have been a professional bioinformatician for more than 15 years, during which time I have contributed to a large number of collaborative projects as a researcher and an investigator. My recent research career has seen me involved as a co-investigator on a number of large multi-omics investigations of complex disease. Many of these projects have used bulk RNA-Seq to characterise pathological states or to stratify disease, and increasingly these studies are looking to use single-cell and spatial transcriptomics to refine the detail of these systems even further.

My research revolves around a small number of central themes, all involving the analysis of biological data:

  • Integration of disparate biological data
  • Molecular characterisation of complex disease
  • High-throughput sequencing analysis, particulatly functional genomics techniques such as RNA-Seq, ChIP-Seq etc

In recent years, I have been involved in a number of large projects connected to one or more of these themes, including the following:

  • Psoriasis Stratification to Optimise Relevant Therapy (PSORT) - MRC, co-Investigator
  • Liver Investigation: Testing Marker Utility in Steatohepatitis (LITMUS) - EU (IMI), co-Investigator
  • Elucidating Pathways of Steatohepatitis (EPoS) - EU (H2020), co-Investigator
  • An in silico based approach to improve the efficacy and precision of drug REPurpOsing TRIALs for a mechanism-based patient cohort with predominant cerebro-cardiovascular phenotypes (REPO-TRIAL) - EU (H2020), co-Investigator
  • Strategic Training Awards for Research Skills - 缅北禁地 Bioinformatics Skills Schools (NUBASS) - BBSRC, Principal Investigator


Teaching

My teaching responsibilities are:

Module Leadership

  • CSC8309 – Genome Scale Data Analytics
  • MMB8052 – Bioinformatics for Biomedical Scientists

Postgraduate Teaching

  • CVR8004 – Clinical Assessment and Investigation

Undergraduate Teaching

  • CMB1011 – Professional and Practical Skills for Bioscientists
  • CMB2000 – Essential Skills in Biomedical Research
  • BGM2062 – Advanced Protein Analysis
  • BGM2063 – Approaches to Analysis of Genes and Genomes
  • BMS3025 – Bioinformatics
  • PED3005 – Advanced Pharmacogenetics

Previous teaching

  • CSC8325 - An Introduction to Bioinformatics Theory and Practice (2019 - 2023), CSC8326 – Advanced Bioinformatics Theory and Practice (2019 - 2023), CSC8313 – Bioinformatics Theory and Practice (2005-2019), MMB8023 – Systems Biology MRes strand (2011 – 2018), GNM8007 – Bioinformatics, Interpretation, Statistics and Data Quality Assurance (2017 – 2018)


Bioinformatics Training

I have prepared and delivered training courses in bioinformatics and programming to life science researchers for many years.


During Coronavirus crisis of 2020 I produced the live-streamed “Lockdown Learning” series. My has >6,000 subscribers and my tutorial videos have >280,000 views.



Publications

  • Articles

    • Vaughan AJ, McMeekin LJ, Hine K, Stubbs IW, Codadu NK, Cockell S, Hill JT, Cowell R, Trevelyan AJ, Parrish RR. . eNeuro 2024, 11(5), ENEURO.0520-23.2024.
    • Govaere O, Cockell SJ, Zatorska M, Wonders K, Tiniakos D, Frey AM, Palmowksi P, Walker R, Porter A, Trost M, Anstee QM, Daly AK. . Biochemical Pharmacology 2024, 228, 116249.
    • Sabatini S, Sen P, Carli F, Pezzica S, Rosso C, Lembo E, Verrastro O, Daly A, Govaere O, Cockell S, Hyotylainen T, Mingrone G, Bugianesi E, Anstee QM, Oresic M, Gastaldelli A. . Cell Reports Medicine 2024, 5(11), 101820.
    • Vacca V, Kamzolas I, Mørch Harder L, Oakley F, Trautwein C, Hatting M, Ross T, Bernardo B, Oldenburger A, Toftegaard Hjuler S, Ksiazek I, Linden D, Schuppan D, Rodriguez-Cuenca S, Manuela Tonini M, Castañeda TR, Kannt A, Rodrigues CMP, Cockell S, Govaere O, Daly AK, Allison M, Honnens de Lichtenberg K, Kim YO, Lindblom A, Oldam S, Andréasson A-C, Schlerman F, Marioneaux J, Sanyal A, Afonso MB, Younes R, Amano Y, Friedman SL, Wang S, Bhattacharya D, Simon E, Paradis V, Burt A, Grypari IM, Davies S, Driessen A, Yashiro H, Pors S, Worm Andersen M, Feigh M, Yunis C, Bedossa P, Stewart M, Cater HL, Wells S, Schattenberg JM, Anstee QM, The LITMUS Investigators, Tiniakos D, Perfield JW, Petsalaki E, Davidsen P, Vidal-Puig A. . Nature Metabolism 2024, 6, 1178-1196.
    • Siachisumo C, Luzzi S, Aldalaqan S, Hysenaj G, Dalgliesh C, Cheung K, Gazzara M, Yonchev ID, James K, Kheirollahi Chadegani M, Ehrmann I, Smith GR, Cockell SJ, Munkley J, Barash Y, Wilson SA, Elliott DJ. . eLife 2024, 12, RP89705.
    • Queen R, Crosier M, Eley L, Kerwin J, Turner JE, Yu J, Alqahtani A, Dhanaseelan T, Overman L, Soetjoadi H, Baldock R, Coxhead J, Boczonadi V, Laude A, Cockell SJ, Kane MA, Lisgo S, Henderson DJ. . PLoS Genetics 2023, 19(11).
    • Zormpas E, Queen R, Comber A, Cockell SJ. . Cell 2023, 186(26), 5677 - 5689.
    • Govaere O, Hasoon M, Alexander L, Cockell S, Tiniakos D, Ekstedt M, Schattenberg JM, Boursier J, Bugianesi E, Ratziu V, LITMUS Investigators, Daly AK, Anstee QM. . Nature Metabolism 2023, 5, 572-578.
    • Hanrath AT, Hatton CF, Gothe F, Browne C, Vowles J, Leary P, Cockell SJ, Cowley SA, James WS, Hambleton S, Duncan CJA. . Frontiers in Immunology 2022, 13, 1035532.
    • Datta HK, Kringen MK, Tuck SP, Salpingidou G, Olstad OK, Gautvik KM, Cockell SJ, Gautvik VT, Prediger M, Wu JJ, Birch MA, Reppe S. . International Journal of Molecular Sciences 2022, 23(6), 2957.
    • James K, Alsobhe A, Cockell SJ, Wipat A, Pocock M. . BMC Bioinformatics 2022, 23, 302.
    • Johnson K, Leary PJ, Govaere O, Barter MJ, Charlton SH, Cockell SJ, Tiniakos D, Zatorska M, Bedossa P, Brosnan MJ, Cobbold JF, Ekstedt M, Aithal GP, Clement K, Schattenberg JM, Boursier J, Ratziu V, Bugianesi E, Anstee QM, Daly AK, LITMUS Consortium Investigators. . JHEP Reports 2022, 4(2), 100409.
    • Donaghy PC, Cockell SJ, Martin-Ruiz C, Coxhead J, Kane J, Erskine D, Koss D, Taylor JP, Morris CM, O'Brien JT, Thomas AJ. . American Journal of Geriatric Psychiatry 2022, 30(9), 964-975.
    • Oud MS, Smits RM, Smith HE, Mastrorosa FK, Holt GS, Houston BJ, de Vries PF, Alobaidi BKS, Batty LE, Ismail H, Greenwood J, Sheth H, Mikulasova A, Astuti GDN, Gilissen C, McEleny K, Turner H, Coxhead J, Cockell S, Braat DDM, Fleischer K, D'Hauwers KWM, Schaafsma E, Consortium GEMINI, Nagirnaja L, Conrad DF, Friedrich C, Kliesch S, Aston KI, Riera-Escamilla A, Krausz C, Gonzaga-Jauregui C, Santibanez-Koref M, Elliott DJ, Vissers LELM, Tuttelmann F, O'Bryan MK, Ramos L, Xavier MJ, van der Heijden GW, Veltman JA. . Nature Communications 2022, 13(154).
    • Kozumi K, Kodama T, Murai H, Sakane S, Govaere O, Cockell S, Motooka D, Kakita N, Yamada Y, Kondo Y, Tahata Y, Yamada R, Hikita H, Sakamori R, Kamada Y, Daly AK, Anstee QM, Tatsumi T, Morii E, Takehara T. . Hepatology 2021, 74(5), 2452-2466.
    • Addison R, Weatherhead SC, Pawitri A, Smith GR, Rider A, Grantham HJ, Cockell SJ, Reynolds NJ. . Redox Biology 2021, 41, 101924.
    • Pfister D, Gonzalo N, Nunez N, Pinyol R, Govaere O, Pinter M, Szydlowska M, Gupta R, Qiu M, Deczkowska A, Weiner A, Muller F, Sinha A, Friebel E, Engleitner T, Lenggenhager D, Moncsek A, Heide D, Stirm K, Kosla J, Kotsiliti E, Leone V, Dudek M, Yousuf S, Inverso D, Singh I, Teijeiro A, Castet F, Montironi C, Haber PK, Tiniakos D, Bedossa P, Cockell S, Younes R, Vacca M, Marra F, Schattenberg JM, Allison M, Bugianesi E, Ratziu R, Pressiani T, DAlessio A, Personeni N, Rimassa L, Daly AK, Scheiner B, Pomej K, Kirstein MM, Vogel A, PeckRadosavljevic M, Hucke F, Finkelmeier F, Waidmann O, Trojan J, Schulze K, Wege H, Koch S, Weinmann A, Bueter M, Rossler F, Siebenhuner A, DeDosso S, Mallm JP, Umansky V, Jugold M, Luedde T, Schietinger A, Schirmacher P, Emu B, Augustin HG, Billeter A, MullerStich B, Kikuchi H, Duda DG, Kutting F, Waldschmidt DT, Ebert MP, Rahbari N, Mei HE, Schulz AR, Ringelhan M, Malek N, Spahn S, Bitzer M, deGalarreta MR, Lujambio A, Dufour JF, Marron TU, Kaseb A, Kudo M, Huang YH, Djouder N, Wolter K, Zender L, Marche PN, Decaens T, Pinato DJ, Rad R, Mertens JC, Weber A, Unger K, Meissner F, Roth S, Jilkova ZM, Claassen M, Anstee QM, Amit I, Knolle P, Becher B, Llovet JM, Heikenwalder M. . Nature 2021, 592, 450-456.
    • Govaere O, Cockell S, Tiniakos D, Queen R, Younes R, Vacca M, Alexander L, Ravaioli F, Palmer J, Petta S, Boursier J, Rosso C, Johnson K, Wonders K, Day CP, Ekstedt M, Oresic M, Darlay R, Cordell H, Marra F, Vidal-Puig A, Bedossa P, Schattenberg JM, Clément K, Allison M, Bugianesi E, Ratziu V, Daly AK, Anstee QM. . Science Translational Medicine 2020, 12(572), eaba4448.
    • Ball SL, Cockell SJ, Wilson JA, Mann DA, Fisher AJ. . Rhinology 2020, 58(6), 581-587.
    • Anstee QM, Darlay R, Cockell S, Meroni M, Govaere O, Tiniakos D, Burt AD, Bedossa P, Palmer J, Liu YL, Aithal GP, Allison M, Yki-Järvinen H, Vacca M, Dufour JF, Invernizzi P, Prati D, Ekstedt M, Kechagias S, Francque S, Petta S, Bugianesi E, Clement K, Ratziu V, Schattenberg JM, Valenti L, Day CP, Cordell HJ, Daly AK. . Journal of Hepatology 2020, 73(3), 505-515.
    • Govaere O, Cockell S, Van Haele M, Wouters J, Van Delm W, Van den Eynde K, Bianchi A, van Eijsden R, Van Steenbergen W, Monbaliu D, Nevens F, Roskams T. . Journal of Pathology 2019, 248(1), 66-76.
    • Davies HR, Hodgson K, Schwalbe E, Coxhead J, Sinclair N, Zou X, Cockell S, Husain A, Nik-Zainal S, Rajan N. . Nature Communications 2019, 10, 4717.
    • Collin J, Queen R, Zerti D, Dorgau B, Hussain R, Coxhead J, Cockell S, Lako M. . Stem Cells (Durham) 2019, 37(5), 593-598.
    • Cheung K, Burgers MJ, Young DA, Cockell S, Reynard LN. . Epigenetics 2019, 15(6-7), 594-603.
    • Munkley J, Li L, Krishnan SRG, Hysenaj G, Scott E, Dalgliesh C, Oo HZ, Maia TM, Cheung K, Ehrmann I, Livermore KE, Zielinska H, Thompson O, Knight B, McCullagh P, McGrath J, Crundwell M, Harries LW, Daugaard M, Cockell S, Barbosa-Morais NL, Oltean S, Elliott DJ. . eLife 2019, 8, e47678.
    • Ehrmann I, Crichton JH, Gazzara MR, James K, Liu Y, Grellscheid SN, Curk T, de Rooij D, Steyn JS, Cockell S, Adams IR, Barash Y, Elliott DJ. . eLife 2019, 8, e39304.
    • Phillips HM, Stothard CA, Shaikh Qureshi WM, Kousa AI, BrionesLeon JA, Khasawneh RR, Sanders R, O'Loughlin C, Mazzotta S, Dodds R, Seidel K, Bates T, Nakatomi M, Cockell SJ, Schneider JE, Mohun TJ, Maehr R, Kist R, Peters H, Bamforth SD. . Development 2019, 146, dev177618.
    • Janus P, Szoltysek K, Zajac G, Stokowy T, Walaszczyk A, Widlak W, Wojtas B, Gielniewski B, Iwanaszko M, Braun R, Cockell S, Perkins ND, Kimmel M, Widlak P. . Cellular Signalling 2018, 46, 23-31.
    • James K, Chipeta C, Parker A, Harding S, Cockell SJ, Gillespie CS, Hallinan J, Barone F, Bowman SJ, Ng W-F, Fisher BA, for the UK Primary Sjögren's Syndrome Registry. . Rheumatology 2018, 57(7), 1222-1227.
    • Szoltysek K, Janus P, Zajac G, Stokowy T, Walaszczyk A, Widlak W, Wojtas B, Gielniewski B, Cockell S, Perkins ND, Kimmel M, Widlak P. . BMC Genomics 2018, 19(1), 813.
    • James K, Gamba P, Cockell SJ, Zenkin N. . Nucleic Acids Research 2017, 45(3), 1105-1113.
    • James K, Cockell SJ, Zenkin N. . Methods 2017, 120, 76-84.
    • Pease LI, Clegg PD, Proctor CJ, Shanley DJ, Cockell SJ, Peffers MJ. . Scientific Reports 2017, 7(1), 14443.
    • Elder A, Bomken S, Wilson I, Blair HJ, Cockell S, Ponthan F, Dormon K, Pal D, Heidenreich O, Vormoor J. . Leukemia 2017, 31, 2577-2586.
    • Hardyman J, Tyson J, Jackson K, Aldridge C, Cockell S, Wakeling L, Valentine RA, Ford D. . Metallomics 2016, 8(3), 337-343.
    • Méplan C, Johnson IT, Polley ACJ, Cockell S, Bradburn DM, Commane DM, Arasaradnam RP, Mulholland F, Zupanic A, Mathers JC, Hesketh J. . The FASEB Journal 2016, 30(8), 2812-2825.
    • Hunter JE, Butterworth JA, Zhao B, Sellier H, Campbell KJ, Thomas HD, Bacon CM, Cockell SJ, Gewurz BE, Perkins ND. . Oncogene 2016, 35(26), 3476-3484.
    • Mullen J, Cockell SJ, Tipney H, Woollard PM, Wipat A. . PeerJ 2016, 4, e1558.
    • Khundakar AA, Hanson PS, Erskine D, Lax NZ, Roscamp J, Karyka E, Tsefou E, Singh P, Cockell SJ, Gribben A, Ramsay L, Blain PJ, Mosimann UP, Lett DJ, Elstner M, Turnbull DM, Xiang CC, Brownstein MJ, O'Brien JT, Taylor JP, Attems J, Thomas AJ, McKeith IG, Morris CM. . Acta Neuropathologica Communications 2016, 4, 66.
    • Mullen J, Cockell SJ, Woollard P, Wipat A. . PLoS One 2016, 11(5), e0155811.
    • Moles A, Butterworth JA, Sanchez A, Hunter JE, Leslie J, Sellier H, Tiniakos D, Cockell SJ, Mann DA, Oakley F, Perkins ND. . Oncogene 2016, 35(35), 4623-4632.
    • Ogo OA, Tyson J, Cockell SJ, Howard A, Valentine RA, Ford D. . Molecular and Cell Biology 2015, 35(6), 977-987.
    • Wakeling LA, Ions LJ, Escolme SM, Cockell SJ, Su T, Dey M, Hampton EV, Jenkins G, Wainwright LJ, McKay JA, Ford D. . Human Genomics 2015, 9, 14.
    • Dubarry M, Lawless C, Banks AP, Cockell S, Lydall D. . G3: Genes, Genomes, Genetics 2015, 5(10), 2187-2197.
    • Gabriel AS, Lafta FM, Schwalbe EC, Nakjang S, Cockell SJ, Iliasova A, Enshaei A, Schwab C, Rand V, Clifford SC, Kinsey SE, Mitchell CD, Vora A, Harrison CJ, Moorman AV, Strathdee G. . Epigenetics 2015, 10(8), 717-726.
    • James K, Al-Ali S, Tarn J, Cockell SJ, Gillespie CS, Hindmarsh V, Locke J, Mitchell S, Lendrem D, Bowman S, Price E, Pease CT, Emery P, Lanyon P, Hunter JA, Gupta M, Bombardieri M, Sutcliffe N, Pitzalis C, McLaren J, Cooper A, Regan M, Giles I, Isenberg D, Saravanan V, Coady D, Dasgupta B, McHugh N, Young-Min S, Moots R, Gendi N, Akil M, Griffiths B, The UK Primary Sjögren’s Syndrome registry, Wipat A, Newton J, Jones DE, Isaacs J, Hallinan J, Ng W-F. . PLoS ONE 2015, 10(12), e0143970.
    • Probert PM, Chung GW, Cockell SJ, Agius L, Mosesso P, White SA, Oakley F, Brown CD, Wright MC. . Toxicological Sciences 2014, 137(2), 350-370.
    • Iannetti A, Ledoux AC, Tudhope SJ, Sellier H, Zhao B, Mowla S, Moore A, Hummerich H, Gewurz BE, Cockell SJ, Jat PS, Willmore E, Perkins ND. . PLoS Genetics 2014, 10(9), e1004642.
    • Werner A, Cockell S, Falconer J, Carlile M, Alnumeir S, Robinson J. . BMC Genomics 2014, 15, 19.
    • Flanagan K, Cockell S, Harwood C, Hallinan J, Nakjang S, Lawry B, Wipat A. . Journal of Integrative Bioinformatics 2014, 11(2), 242.
    • Werner Andreas, Cockell Simon, Falconer Jane, Alnumeir Sammer, Robinson John. Production of small genic RNAs and endogenous siRNAs from sense/antisense transcripts in human cells. Genome Biology 2013. Submitted.
    • Lord P, Cockell S, Stevens R. . Future Internet 2012, 4(4), 1004-1015.
    • Lee KC, Padget K, Curtis Hannah, Cowell IG, Moiani D, Sondka Z, Morris NK, Jackson GH, Cockell SJ, Tainer JA, Austin CA. . Biology Open 2012, 1(9), 863-873.
    • Weile J, James K, Hallinan J, Cockell SJ, Lord P, Wipat A, Wilkinson DJ. . Bioinformatics 2012, 28(11), 1495-1500.
    • Stadler LKJ, Hoffmann T, Tomlinson DC, Song Q, Lee T, Busby M, Nyathi Y, Gendra E, Tiede C, Flanagan K, Cockell SJ, Wipat A, Harwood C, Wagner SD, Knowles MA, Davis JJ, Keegan N, KoFerrigno P. . Protein Engineering Design and Selection 2011, 24(9), 751-763.
    • Weile J, Pocock M, Cockell SJ, Lord P, Dewar JM, Holstein EM, Wilkinson D, Lydall D, Hallinan J, Wipat A. . Bioinformatics 2011, 27(9), 1299-1306.
    • Parnell LD, Lindenbaum P, Shameer K, Dall'Olio GM, Swan DC, Jensen LJ, Cockell SJ, Pedersen BS, Mangan ME, Miller CA, Albert I. . PLoS Computational Biology 2011, 7(10), e1002216.
    • Emami K, Morris NJ, Cockell SJ, Golebiowska G, Shu QY, Gatehouse AMR. . Journal of Agricultural and Food Chemistry 2010, 58(11), 6912-6922.
    • Cockell SJ, Weile J, Lord P, Wipat C, Andriychenko D, Pocock M, Wilkinson D, Young M, Wipat A. . Journal of Integrative Bioinformatics 2010, 7(3), 116.
    • Cockell SJ, Baldo O, Jackson RM. . Bioinformatics 2007, 23(5), 573-581.

  • Book Chapter

    • Cockell S, Bashton M, Gillespie CS. . In: Rueda, L, ed. Microarray Image and Data Analysis: Theory and Practice. Boca Raton: CRC Press, 2014.

  • Conference Proceedings (inc. Abstracts)

    • James K, Cockell SJ, Gillespie CS, Assi LK, Bowman S, Griffiths B, Ng WF, UKPSSR. . In: The 13th International Symposium on Sjögren's Syndrome. 2015, Bergen, Norway: Wiley-Blackwell.
    • Al-Ali S, Skelton A, Cockell S, Tarn J, James K, Bowman SJ, Griffiths B, Locke J, Young D, Ng WF, UKPSSR. . In: 13th International Symposium on Sjögren's Syndrome. 2015, Bergen, Norway: Wiley-Blackwell Publishing Ltd.
    • Elder A, Blair H, Dormon K, Bomken S, Cockell SJ, Heidenreich O, Vormoor J. . In: 57th ASH Annual Meeting. 2015, Orlando, USA: American Society of Hematology.
    • James K, Al-Ali S, Tarn J, Cockell SJ, Gillespie CS, Bowman S, Isaacs J, Jones DE, Newton J, Price E, Wipat A, Hallinan J, Ng WF, UKPSSR. . In: The 13th International Symposium on Sjögren's Syndrome. 2015, Bergen, Norway: Wiley-Blackwell.
    • James K, Al-Ali S, Tarn J, Cockell SJ, Gillespie CS, Bowman S, Isaacs J, Jones DE, Newton J, Price E, Wipat A, Hallinan J, Ng WF, UKPSSR. . In: The 13th International Symposium on Sjögren's Syndrome. 2015, Bergen, Norway: Wiley-Blackwell.
    • Tarn J, Cockell S, Gillespie C, Al-Ali S, James K, Locke J, Bowman S, Griffiths B, Young D, Ng WF. . In: ACR/ARHP Annual Meeting. 2014, Boston, MA, USA: Wiley-Blackwell Publishing.
    • Al-Ali S, Cockell S, Skelton A, James K, Tarn J, Young D, Griffiths B, Bowman S, Locke J, Ng WF. . In: ACR/ARHP Annual Meeting. 2014, Boston, MA, USA: Wiley-Blackwell Publishing.
    • James K, Cockell SJ, Gillespie CS, Assi L, Bowman S, Griffiths B, Ng WF, UKPSSR. . In: Annual European Congress of Rheumatology. 2014, Paris, France: BMJ Group.
    • Reppe S, Olstad OK, Cockell SJ, Sanderson P, Gautvik VT, Gautvik KM, Datta H. . In: 2013 Annual Meeting of the American Society for Bone and Mineral Research. 2013, Baltimore, MD, USA: Wiley-Blackwell.
    • Nesbitt V, Pitceathly R, Cockell S, Poulton J, Rahman S, Hanna M, Taylor R, Chinnery P, Turnbull D, McFarland R. . In: Association of British Neurologists (ABN) joint meeting with the Royal College of Physicians (RCP). 2013, London, UK: BMJ Publishing Group.
    • Pratt AG, Brown PM, Cockell SJ, Wilson G, Isaacs JD. . In: 33rd European Workshop for Rheumatology Research. 2013, Prague, Czech Republic: BMJ Publishing Group.
    • Nesbitt V, Pitceathly R, Cockell S, Poulton J, Rahman S, Hanna M, Turnbull D, McFarland R. . In: United Kingdom Neuromuscular Translational Research Conference. 2012, 缅北禁地 upon Tyne: Elsevier Ltd.
    • Pratt AG, Brown PM, Cockell SJ, Wilson G, Isaacs JD. . In: Annual Scientific Meeting of the American College of Rheumatology (ACR). 2012, Washington, DC, USA: John Wiley & Sons, Inc.

  • Letters

    • Masi AC, Fofanova TY, Lamb CA, Auchtung JM, Britton RA, Estes MK, Ramani S, Cockell S, Coxhead J, Embleton ND, Berrington JE, Petrosino JF, Stewart CJ. . Gut 2022, 71(10), 2141-2143.
    • Hoogland C, O'Gorman M, Bogard P, Gibson F, Berth M, Cockell SJ, Ekefjard A, Forsstrom-Olsson O, Kapferer A, Nilsson M, Martinez-Bartolome S, Albar JP, Echevarria-Zomeno S, Martinez-Gomariz M, Joets J, Binz PA, Taylor CF, Dowsey A, Jones AR. . Nature Biotechnology 2010, 28(7), 655-656.

  • Report

    • Misirli G, Hallinan JS, Pocock M, Cockell SJ, Weile J, Wipat A. . 缅北禁地 upon Tyne: School of Computing Science, University of 缅北禁地 upon Tyne, 2011. School of Computing Science Technical Report Series 1237.

  • Reviews

    • James K, Wipat A, Cockell SJ. . Briefings in Functional Genomics 2022, 21(4), 243-269.
    • Zerti Z, Collin J, Queen R, Cockell SJ, Lako M. . Current Eye Research 2020, 45(3), 385-396.